circRNA basic information
circBase ID: hsa_circ_0014130
Name: hsa_circ_PIP5K1A
Synonym: -
Host Gene: PIP5K1A
Genomic location(hg19): chr1:151206672-151212515:+
Genomic location(hg38): chr1:151234196-151240039:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung carcinoma
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissues; adjacent lung tissues / adjacent non-cancerous tissues

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: interleukin 7, insulin-like growth factor binding protein 1, transcription factor E2F7, MAPK signaling pathway, Ubiquitin mediated proteolysis, TGF-beta signaling pathway
Associated microRNA: miR-216a-3p, miR-302a-3p, miR-892a, miR-493-5p, miR-200c-5p
Biological function: Potential involvement in NSCLC tumorigenesis, progression and metastasis; potential biomarker for NSCLC diagnosis.
Molecular mechanism: Predicted to act as a miRNA sponge forming a circRNA-miRNA-mRNA network (Top-5 miRNAs; 333 target genes) based on TargetScan/miRanda predictions.
Biological pathway or process:

ceRNA regulation (other); MAPK (other); TGF-beta/SMAD (other); ubiquitination (other); proliferation (other); invasion (other); metastasis (other); migration (other)

Detected method:
Q
M
Validation methods:

Microarray; RNase R Treatment; RT-qPCR; divergent primers PCR; Sanger Sequencing; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Diagnostic potential (AUC 0.878); high expression associated with TNM stage and lymphatic metastasis.

Description:

hsa_circ_0014130 is significantly up-regulated in NSCLC tissues and is associated with higher TNM stage and lymphatic metastasis. It shows diagnostic potential (AUC 0.878) and is predicted to act via a ceRNA-like circRNA-miRNA-mRNA network involving miR-216a-3p, miR-302a-3p, miR-892a, miR-493-5p and miR-200c-5p, with enriched pathways including MAPK and TGF-beta signaling and ubiquitin-mediated proteolysis.

Confidence score:

0.6841

Other information
Title:

Microarray profile of circular RNAs identifies hsa_circ_0014130 as a new circular RNA biomarker in non-small cell lung cancer.

Journal: Scientific reports
Published: 2018
PubMed ID: 29440731
Study type:

combined biological and clinical study

Data availability: The datasets generated during and/or analysed during the current study are available from the corresponding author on reasonable request.
Code availability: -