circRNA basic information
circBase ID: hsa_circ_0001165
Name: hsa_circ_NCOA3
Synonym: circ_0001165 / hsa_circ_001165
Host Gene: NCOA3
Genomic location(hg19): chr20:46252654-46262380:+
Genomic location(hg38): chr20:47623910-47633636:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005580
MONDO name: esophageal squamous cell carcinoma
Disease details: esophageal squamous cell carcinoma / ESCC
Disease DO ID:
3748
Disease MeSH ID:
C562729; D000077277
Disease NCIt ID:
C4024
Disease ICD11 ID:
1417891145
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ESCC tissues; adjacent non-tumor tissues

Cell lines:

KYSE30; KYSE150; KYSE510; TE-1; Eca109; HEK 293; HET-1A; 293 T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: TNS3, EIF4A3, AGO2
Associated microRNA: miR-381-3p
Biological function: promotes ESCC cell proliferation, migration, invasion and in vivo tumor growth
Molecular mechanism: EIF4A3 promotes biogenesis of hsa_circ_0001165; hsa_circ_0001165 sponges miR-381-3p and upregulates TNS3
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; RNA-seq; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Transfection; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; Wound Healing Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; Luciferase Reporter Assay; Western Blot; IHC (Immunohistochemistry); In Vivo Animal Model; Bioinformatics Analysis

Clinical significance:

hsa_circ_0001165 expression is positively associated with patients' TNM staging; potential biomarker and therapeutic target for ESCC

Description:

hsa_circ_0001165 is up-regulated in ESCC tissues and cell lines and promotes proliferation, migration, invasion, and xenograft tumor growth. Mechanistically, EIF4A3 enhances hsa_circ_0001165 biogenesis, and hsa_circ_0001165 functions as a ceRNA by sponging miR-381-3p to increase TNS3 expression.

Confidence score:

0.8771

Other information
Title:

EIF4A3-mediated oncogenic circRNA hsa_circ_0001165 advances esophageal squamous cell carcinoma progression through the miR-381-3p/TNS3 pathway.

Journal: Cell biology and toxicology
Published: 2024
PubMed ID: 39382613
Study type:

combined biological and clinical study

Data availability: GSE53622; 10.1007/s10565-024-09927-9
Code availability: -