circRNA basic information
circBase ID: hsa_circ_0003789
Name: hsa_circ_TSN
Synonym: circTSN
Host Gene: TSN
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005002
MONDO name: chronic obstructive pulmonary disease
Disease details: Chronic Obstructive Pulmonary Disease / COPD
Disease DO ID:
3083
Disease MeSH ID:
D029424
Disease NCIt ID:
C3199
Disease ICD11 ID:
133207228
Disease OMIM ID:
606963
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral blood; peripheral leukocytes; lung tissues

Cell lines:

293T; BEAS-2B

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: GATA6, IL-6, IL-1beta, TNF-alpha
Associated microRNA: miR-144-3p
Biological function: Acts as an exercise-responsive circulating biomarker and modulates inflammatory signaling in airway epithelial cells.
Molecular mechanism: circTSN functions as a cytoplasmic miRNA sponge for miR-144-3p to relieve repression of GATA6, thereby modulating inflammatory gene expression.
Biological pathway or process:

inflammation (inhibits); ceRNA regulation (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; RNase R Treatment; FISH / smFISH; Luciferase Reporter Assay; Transfection; Bioinformatics Analysis; Clinical Sample Validation; In Vivo Animal Model; Cohort Study

Clinical significance:

circTSN is an exercise-responsive circulating RNA negatively associated with systemic inflammation and may serve as a systemic biomarker during pulmonary rehabilitation in COPD.

Description:

In COPD rehabilitation, circTSN increases after exercise training and is inversely associated with systemic inflammatory markers. It localizes mainly in the cytoplasm and acts as a ceRNA by sponging miR-144-3p to de-repress GATA6, thereby modulating inflammatory gene expression in airway epithelial cells and supporting its utility as a systemic biomarker of exercise-induced adaptation.

Confidence score:

0.7693

Other information
Title:

Exercise-responsive circTSN as a potential systemic biomarker during COPD rehabilitation.

Journal: Frontiers in medicine
Published: 2025
PubMed ID: 41416079
Study type:

combined biological and clinical study

Data availability: GSE235174; GSE240656; GSE268499; https://zenodo.org/records/17427212
Code availability: -