circRNA basic information
circBase ID: hsa_circ_0031431
Name: hsa_circ_COCH
Synonym: circCOCH
Host Gene: COCH
Genomic location(hg19): chr14:31346777-31349940:+
Genomic location(hg38): chr14:30877571-30880734:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: Hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent normal tissue

Cell lines:

SNU-398; Hep3B; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: EGFR, IGF2BP3, Ago2
Associated microRNA: miR-450a
Biological function: promotes HCC cell proliferation, migration and invasion; promotes tumor growth and metastasis; inhibits apoptosis (via miR-450a regulation)
Molecular mechanism: circCOCH acts as a miR-450a sponge to upregulate EGFR and activate EGFR-induced PI3K/AKT/mTOR signaling; IGF2BP3 mediates circCOCH biogenesis by binding flanking intronic sequences
Biological pathway or process:

PI3K/AKT/mTOR (promotes); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Western Blot; In Vivo Animal Model; Clinical Sample Validation

Clinical significance:

circCOCH expression in HCC tissues was significantly higher than in normal tissues, suggesting its potential as a biomarker for HCC patients; study lacks samples for survival analysis

Description:

circCOCH (hsa_circ_0031431), derived from the COCH gene, is up-regulated in HCC tissues and cell lines and mainly localized in the cytoplasm. It promotes HCC proliferation and metastatic phenotypes by sponging miR-450a to increase EGFR expression and activate the EGFR-driven PI3K/AKT/mTOR pathway; IGF2BP3 supports its biogenesis via binding flanking intronic sequences.

Confidence score:

0.8412

Other information
Title:

CircCOCH plays a critical role in Hepatocellular carcinoma through modulating miR-450a and activating PI3K/mTOR pathway.

Journal: Translational oncology
Published: 2024
PubMed ID: 39181116
Study type:

combined biological and clinical study

Data availability: GSE164803; GSE97332
Code availability: -