circRNA basic information
circBase ID: hsa_circ_0001649
Name: hsa_circ_SHPRH
Synonym: circSHPRH
Host Gene: SHPRH
Genomic location(hg19): chr6:146209155-146216113:-
Genomic location(hg38): chr6:145888019-145894977:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
 5672, 9256
Disease MeSH ID:
 -
Disease NCIt ID:
 C4978
Disease ICD11 ID:
 -
Disease OMIM ID:
 114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

leukocytes; whole blood
Cell lines:

-
In vivo animal model:

-
circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: -
Molecular mechanism: -
Biological pathway or process:

not specified
Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation
Clinical significance:

-
Description:

circSHPRH was tested during the initial RT-qPCR candidate analysis and was upregulated in a small CRC-versus-control leukocyte subset. It was not selected for further analysis, and no mechanism or clinical diagnostic performance was reported for this circRNA.
Confidence score:

0.2995
Other information
Title:

Upregulation of circular and linear METTL3 and USP3 in colorectal cancer.

Journal: Oncology letters
Published: 2021
PubMed ID: 34345300
Study type:

clinical study
Data availability: available from the corresponding author on reasonable request
Code availability: -