circRNA basic information
circBase ID: hsa_circ_0055054
Name: hsa_circ_GFPT1
Synonym: -
Host Gene: GFPT1
Genomic location(hg19): chr2:69575302-69577315:-
Genomic location(hg38): chr2:69348170-69350183:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; adjacent normal tissues

Cell lines:

MIHA; MHCC97L; MHCC97H; Huh7; Hep3B; HCCLM3

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MUC1
Associated microRNA: miR-122-5p
Biological function: Promotes HCC cell proliferation, migration and invasion; promotes HCC growth in vivo.
Molecular mechanism: Acts as a sponge for miR-122-5p to regulate MUC1 expression (ceRNA axis), supported by dual-luciferase assays and rescue experiments.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

RT-qPCR; RNase R Treatment; Luciferase Reporter Assay; Transfection; CCK8; Wound Healing Assay; Transwell Assay; Western Blot; In Vivo Animal Model; Bioinformatics Analysis; Clinical Sample Validation; Microarray

Clinical significance:

-

Description:

hsa_circ_0055054 is up-regulated in HCC and promotes HCC cell proliferation, migration and invasion. It functions as a ceRNA by binding miR-122-5p, thereby increasing MUC1 expression; circRNA knockdown suppresses tumor growth in a MHCC97L xenograft model.

Confidence score:

0.7416

Other information
Title:

Mucin 1 expression is regulated by hsa_circ_0055054/microRNA‑122‑5p and promotes hepatocellular carcinoma development.

Journal: Oncology letters
Published: 2024
PubMed ID: 38983125
Study type:

combined biological and clinical study

Data availability: GSE97332
Code availability: -