circRNA basic information
circBase ID: hsa_circ_0104824
Name: hsa_circ_NTRK3
Synonym: -
Host Gene: NTRK3
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: Breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

breast cancer tissues; adjacent normal tissues; peripheral blood; plasma

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: NTRK3
Associated microRNA: hsa-miR-1278, hsa-miR-140-3p, hsa-miR-197, hsa-miR-599, hsa-miR-637
Biological function: Associated with cancer-related biological processes including metastasis (cell migration and cell-cell adhesion) and proliferation (regulation of cell cycle and cell differentiation) in breast cancer; proposed as a diagnostic biomarker.
Molecular mechanism: Predicted miRNA sponge (ceRNA-like) mechanism via binding multiple miRNAs (top 5 predicted).
Biological pathway or process:

migration (other); metastasis (other); proliferation (other); cell cycle (other); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Downregulated in breast cancer tissues and peripheral blood and shows diagnostic value by ROC analysis (AUC 0.823 in tissues; AUC 0.849 in peripheral blood).

Description:

hsa_circ_0104824 (host gene NTRK3) is significantly downregulated in breast cancer tissues and in patient peripheral blood. It shows good diagnostic performance by ROC analysis and is proposed to act as an miRNA sponge based on bioinformatic predictions, with inferred links to metastasis- and proliferation-related processes.

Confidence score:

0.5047

Other information
Title:

Identification of Hsa_circ_0104824 as a Potential Biomarkers for Breast Cancer.

Journal: Technology in cancer research & treatment
Published: 2020
PubMed ID: 33043809
Study type:

combined biological and clinical study

Data availability: Supplemental material for this article is available online.
Code availability: -