circRNA basic information
circBase ID: -
Name: hsa_circ_GSK3beta
Synonym: circGSK3beta
Host Gene: GSK3beta
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: unclear
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
 0004975
MONDO name: Alzheimer disease
Disease details: Alzheimer's disease / AD
Disease DO ID:
 10652
Disease MeSH ID:
 D000544
Disease NCIt ID:
 C2866
Disease ICD11 ID:
 1611724421
Disease OMIM ID:
 -
Species: Human
Species details: Homo sapiens
Tissue specimen:

frontal lobe (prefrontal cortex); frontal cortex brain sections
Cell lines:

SH-Sy5y
In vivo animal model:

genetically engineered animal model
circRNA-disease information
Expression pattern:
UP
Associated gene: tau, GSK3beta
Associated microRNA: -
Biological function: Regulates tau phosphorylation and reduces phospho-tau upon overexpression in neuronal cells; reduces total GSK3beta abundance.
Molecular mechanism: Overexpression of the circRNA isoform alters protein abundance/phosphorylation states (tau phosphorylation; total GSK3beta).
Biological pathway or process:

other pathway/process (other)
Detected method:
H
S
Validation methods:

RNA-seq; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; ISH (In Situ Hybridization); Transfection; Western Blot; Clinical Sample Validation; In Vivo Animal Model; Bioinformatics Analysis
Clinical significance:

-
Description:

This circGSK3beta exon 9-to-7 isoform is up-regulated at AD synapses and, when overexpressed in neuron-differentiated SH-Sy5y cells, reduces phospho-tau and total GSK3beta levels, indicating a regulatory effect on tau phosphorylation in an AD-relevant context.
Confidence score:

0.7165
Other information
Title:

mRNA and circRNA mislocalization to synapses are key features of Alzheimer's disease.

Journal: PLoS genetics
Published: 2024
PubMed ID: 39074152
Study type:

combined biological and clinical study
Data availability: -
Code availability: -