circRNA basic information
circBase ID: hsa_circ_0006168
Name: hsa_circ_CNOT6L
Synonym: circ_0006168
Host Gene: CNOT6L
Genomic location(hg19): chr4:78694234-78697546:-
Genomic location(hg38): chr4:77773080-77776392:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005580
MONDO name: esophageal squamous cell carcinoma
Disease details: esophageal squamous cell carcinoma
Disease DO ID:
3748
Disease MeSH ID:
C562729; D000077277
Disease NCIt ID:
C4024
Disease ICD11 ID:
1417891145
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ESCC tissue samples; adjacent non-tumor tissues

Cell lines:

Eca109; KYSE150; KYSE180; KYSE450; HET-1A

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: XBP1
Associated microRNA: miR-516b-5p
Biological function: promotes migration, invasion and proliferation of ESCC cells
Molecular mechanism: Acts as a miRNA sponge (ceRNA) for miR-516b-5p to up-regulate XBP1 expression
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Transfection; Wound Healing Assay; Transwell Assay; MTT; Colony Formation Assay; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

High expression of circ_0006168 in tumor tissues was correlated with large tumor size, positive lymph node metastasis and advanced TNM stage in ESCC patients.

Description:

Circ_0006168 is up-regulated in ESCC tissues and cell lines and promotes ESCC cell proliferation, migration, and invasion. Mechanistically, it functions as a ceRNA by sponging miR-516b-5p, thereby increasing XBP1 expression; rescue experiments support the circ_0006168/miR-516b-5p/XBP1 axis.

Confidence score:

0.778

Other information
Title:

Circ_0006168 Promotes the Migration, Invasion and Proliferation of Esophageal Squamous Cell Carcinoma Cells via miR-516b-5p-Dependent Regulation of XBP1.

Journal: OncoTargets and therapy
Published: 2021
PubMed ID: 33883902
Study type:

combined biological and clinical study

Data availability: -
Code availability: -