circRNA basic information
circBase ID: hsa_circ_0066568
Name: hsa_circ_ROBO1
Synonym: circROBO1
Host Gene: ROBO1
Genomic location(hg19): chr3:78763546-78767033:-
Genomic location(hg38): chr3:78714396-78717883:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; para-cancerous normal tissues; adjacent tissues; xenograft tumor tissues

Cell lines:

HepG2; SMMC-7721; Huh-7; LO2; HCCLM9; HEK 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CCNT2, AGO2
Associated microRNA: miR-130a-5p
Biological function: promotes HCC cell proliferation and tumor growth; increases G2/M phase cells
Molecular mechanism: circROBO1 acts as a competing endogenous RNA (miRNA sponge) for miR-130a-5p, relieving repression on CCNT2 and increasing CCNT2 expression
Biological pathway or process:

proliferation (promotes); cell cycle (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; RNA Pull-Down; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; EdU Staining; Cell Cycle Assay; In Vivo Animal Model; H&E Staining; Survival Analysis; Clinical Sample Validation; Cohort Study

Clinical significance:

elevated circROBO1 was closely correlated with worse prognosis for HCC patients; HCC cases with higher circROBO1 had worse OS and RFS

Description:

circROBO1 (hsa_circ_0066568), derived from ROBO1, is upregulated in HCC and mainly localized in the cytoplasm. It promotes HCC proliferation and tumor growth by sponging miR-130a-5p, thereby upregulating CCNT2, and high circROBO1 predicts worse OS/RFS.

Confidence score:

0.8768

Other information
Title:

Nanoparticles Mediated circROBO1 Silencing to Inhibit Hepatocellular Carcinoma Progression by Modulating miR-130a-5p/CCNT2 Axis.

Journal: International journal of nanomedicine
Published: 2023
PubMed ID: 37020690
Study type:

combined biological and clinical study

Data availability: GSE156088
Code availability: -