circRNA basic information
circBase ID: hsa_circ_0087199
Name: hsa_circ_GDA
Synonym: circ_0087199
Host Gene: GDA
Genomic location(hg19): chr9:74817486-74834422:+
Genomic location(hg38): chr9:72202570-72219506:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005076
MONDO name: periodontitis
Disease details: periodontitis
Disease DO ID:
824, 9893
Disease MeSH ID:
D010518
Disease NCIt ID:
C34918
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

periodontal ligament tissues

Cell lines:

PDLCs

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: TLR4
Associated microRNA: miR-527
Biological function: promotes LPS-induced PDLC injury (apoptosis, inflammation, oxidative stress) and inhibits viability/proliferation
Molecular mechanism: ceRNA mechanism: circ_0087199 sponges miR-527 to regulate TLR4
Biological pathway or process:

apoptosis (promotes); proliferation (inhibits); inflammation (promotes); oxidative phosphorylation (unclear); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; ELISA; Western Blot; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

-

Description:

circ_0087199 is up-regulated in periodontal ligament tissues from periodontitis patients and in LPS-stimulated PDLCs. Functionally, circ_0087199 promotes LPS-induced PDLC injury (reduced viability/proliferation and increased apoptosis, inflammation, and oxidative stress) by acting as a ceRNA that sponges miR-527 to increase TLR4.

Confidence score:

0.7416

Other information
Title:

Circ_0087199 depletion attenuates lipopolysaccharides-induced human periodontal ligament cell injury through the miR-527/TLR4 axis.

Journal: Immunity, inflammation and disease
Published: 2024
PubMed ID: 38270303
Study type:

combined biological and clinical study

Data availability: available from the corresponding author on reasonable request
Code availability: -