circRNA basic information
circBase ID: -
Name: hsa_circ_ATAD3B
Synonym: circ_ATAD3B
Host Gene: ATAD3B
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer / BC
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

BC tumor tissues; breast cancer samples; normal samples

Cell lines:

MDA-MB-231; MCF7; 293 T

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: MX2
Associated microRNA: miR-570-3p
Biological function: Suppresses breast cancer cell survival, viability and proliferation; acts as a tumor suppressor and potential diagnostic or therapeutic biomarker.
Molecular mechanism: circ_ATAD3B functions as a miR-570-3p sponge and increases MX2 mRNA and protein expression, thereby inhibiting breast cancer cell proliferation through the miR-570-3p/MX2 axis.
Biological pathway or process:

proliferation (inhibits); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Transfection; CCK8; Colony Formation Assay; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Western Blot; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Circ_ATAD3B showed favorable diagnostic value for differentiating breast cancer from control samples and may serve as a novel biomarker for diagnosis and treatment.

Description:

circ_ATAD3B is down-regulated in breast cancer tissues and cell lines and acts as a tumor suppressor. It sponges miR-570-3p to increase MX2 expression, thereby inhibiting breast cancer cell viability and proliferation, and shows potential diagnostic and therapeutic biomarker value.

Confidence score:

0.7759

Other information
Title:

Circ_ATAD3B inhibits cell proliferation of breast cancer via mediating the miR-570-3p/MX2 axis.

Journal: Preventive medicine
Published: 2023
PubMed ID: 37286092
Study type:

combined bioinformatics and biological research

Data availability: GSE101124; GSE165884; GSE182471; Data will be made available on request
Code availability: -