circRNA basic information
circBase ID: hsa_circ_0001819
Name: hsa_circ_UBR5
Synonym: circUBR5
Host Gene: UBR5
Genomic location(hg19): chr8:103372298-103373854:-
Genomic location(hg38): chr8:102360070-102361626:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005494
MONDO name: triple-negative breast carcinoma
Disease details: triple-negative breast cancer / TNBC
Disease DO ID:
0060081
Disease MeSH ID:
D064726
Disease NCIt ID:
C71732
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

TNBC tissues; adjacent non-tumor breast tissues; xenograft tissues; lung tissues

Cell lines:

MCF10A; MCF-7; SK-BR-3; BT549; MDA-MB-231; MDA-MB-468

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: UBR5 mRNA, UBR5, Ago2, RISC
Associated microRNA: miR-1179
Biological function: Promotes malignant growth, proliferation, viability, invasion, migration, xenograft tumor growth, and lung metastasis of TNBC cells; high expression is associated with shorter overall survival.
Molecular mechanism: circUBR5 acts as a ceRNA/miRNA sponge for miR-1179, reducing miR-1179-mediated targeting of UBR5 mRNA and thereby up-regulating UBR5 expression.
Biological pathway or process:

ceRNA regulation (promotes); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes)

Detected method:
Q
Validation methods:

RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; H&E Staining; Western Blot; Cohort Study; Survival Analysis; Bioinformatics Analysis

Clinical significance:

Higher circUBR5 expression in TNBC tissues was associated with shorter overall survival and may serve as a prognostic biomarker and candidate therapeutic target.

Description:

circUBR5 is a UBR5-derived human circRNA that is up-regulated in TNBC tissues and cells and whose high expression predicts poorer overall survival. It promotes TNBC cell proliferation, viability, migration, invasion, xenograft growth, and lung metastasis by sponging miR-1179 and up-regulating UBR5. The study supports circUBR5 as a prognostic biomarker and potential therapeutic target in TNBC.

Confidence score:

0.8658

Other information
Title:

CircUBR5 acts as a ceRNA for miR-1179 to up-regulate UBR5 and to promote malignancy of triple-negative breast cancer.

Journal: American journal of cancer research
Published: 2022
PubMed ID: 35812044
Study type:

combined biological and clinical study

Data availability: -
Code availability: -