circRNA basic information
circBase ID: hsa_circ_0001361
Name: hsa_circ_FNDC3B
Synonym: circFNDC3B
Host Gene: FNDC3B
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005580
MONDO name: esophageal squamous cell carcinoma
Disease details: esophageal squamous cell carcinoma / ESCC
Disease DO ID:
3748
Disease MeSH ID:
C562729; D000077277
Disease NCIt ID:
C4024
Disease ICD11 ID:
1417891145
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ESCC tissues; matched esophageal paracancerous tissues

Cell lines:

OE19; TE-1; HEEC

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MYO5A
Associated microRNA: miR-370-3p, miR-136-5p
Biological function: Promotes ESCC cell proliferation and inhibits apoptosis; promotes tumor growth in vivo.
Molecular mechanism: Acts as a ceRNA sponge for miR-370-3p/miR-136-5p to relieve repression of MYO5A, promoting ESCC progression.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

Actinomycin D / DRB Stability Assay; RNase R Treatment; Sanger Sequencing; Back-Splice Junction PCR / divergent primers PCR; RT-qPCR; Clinical Sample Validation; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Annexin V/PI Flow Cytometry; In Vivo Animal Model; ROC Analysis

Clinical significance:

circFNDC3B had high diagnostic potential (AUC 0.8586) and was proposed as a diagnostic marker for ESCC.

Description:

circFNDC3B is up-regulated in ESCC tissues and cell lines and promotes proliferation while inhibiting apoptosis. Mechanistically, it functions as a ceRNA sponge for miR-370-3p and miR-136-5p to increase MYO5A expression, enhancing ESCC progression and tumor growth in xenografts; it also shows diagnostic potential by ROC analysis.

Confidence score:

0.8094

Other information
Title:

circFNDC3B promotes esophageal squamous cell carcinoma progression by targeting MYO5A via miR-370-3p/miR-136-5p.

Journal: BMC cancer
Published: 2023
PubMed ID: 37667251
Study type:

combined biological and clinical study

Data availability: All data used to support the findings of this study are available from the corresponding author upon request.
Code availability: -