circRNA basic information
circBase ID: hsa_circ_0072309
Name: hsa_circ_LIFR
Synonym: circLIFR / circLIF receptor subunit alpha (LIFR)
Host Gene: LIFR
Genomic location(hg19): chr5:38523520-38530768:-
Genomic location(hg38): chr5:38523418-38530666:-
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005075
MONDO name: thyroid gland papillary carcinoma
Disease details: papillary thyroid cancer / PTC
Disease DO ID:
3969
Disease MeSH ID:
-
Disease NCIt ID:
C4035
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PTC tissues; adjacent normal tissues; tumor tissues

Cell lines:

TPC-1; GLAG-66; B-CPAP; Nthy-ori3-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: TIMP2, Ago2
Associated microRNA: miR-429
Biological function: Inhibits PTC cell proliferation and migration and suppresses tumor growth in vivo (tumor-suppressive role).
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-429 to upregulate TIMP2; validated by luciferase, RIP (Ago2), and FISH co-localization; rescue experiments support the axis.
Biological pathway or process:

proliferation (inhibits); migration (inhibits); ceRNA regulation (promotes); other pathway/process (inhibits)

Detected method:
Q
S
Validation methods:

RT-qPCR; RNase R Treatment; Sanger Sequencing; Back-Splice Junction PCR / divergent primers PCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Wound Healing Assay; Transwell Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Clinical Sample Validation; Bioinformatics Analysis; RNA-seq

Clinical significance:

Potential biomarker and therapeutic target for PTC (no explicit prognosis/diagnosis performance reported).

Description:

circLIFR (hsa_circ_0072309), derived from LIFR, is down-regulated in papillary thyroid cancer and acts as a tumor suppressor by inhibiting proliferation and migration. It functions as a miR-429 sponge to relieve repression of TIMP2, and circLIFR overexpression suppresses xenograft tumor growth.

Confidence score:

0.866

Other information
Title:

Circular RNA circLIFR suppresses papillary thyroid cancer progression by modulating the miR-429/TIMP2 axis.

Journal: Journal of cancer research and clinical oncology
Published: 2024
PubMed ID: 38914806
Study type:

combined biological and clinical study

Data availability: GSE171011; GSE168449
Code availability: -