circRNA basic information
circBase ID: hsa_circ_0001649
Name: hsa_circ_SHPRH
Synonym: -
Host Gene: SHPRH
Genomic location(hg19): chr6:146209155-146216113:-
Genomic location(hg38): chr6:145888019-145894977:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005184
MONDO name: pancreatic ductal adenocarcinoma
Disease details: pancreatic ductal adenocarcinoma / PDAC
Disease DO ID:
3498, 3587
Disease MeSH ID:
D021441
Disease NCIt ID:
C9120
Disease ICD11 ID:
581089833
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PDAC tissues; paired normal tissues; tumor tissues; matched non-cancerous tissues

Cell lines:

SW1990; PANC1; Capan-2; BxPC3; HPDE

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: Hsa_circ_0001649 acts as a tumor suppressor in PDAC; overexpression reduces cell proliferation and colony-forming ability and promotes apoptosis.
Molecular mechanism: Overexpression of hsa_circ_0001649 suppresses proliferation and colony formation and facilitates apoptosis, with increased caspase-3 and caspase-9 activity; other mechanisms were not explored sufficiently.
Biological pathway or process:

proliferation (inhibits); apoptosis (promotes); other pathway/process (other)

Detected method:
Q
Validation methods:

RT-qPCR; Clinical Sample Validation; Cohort Study; Survival Analysis; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry

Clinical significance:

Downregulation of hsa_circ_0001649 was correlated with tumor stage and differentiation grade; hsa_circ_0001649 could serve as an independent prognostic indicator for overall survival in patients with PDAC, and high expression was associated with better 5-year overall survival.

Description:

This study found that hsa_circ_0001649 is down-regulated in PDAC tissues and cell lines. Higher hsa_circ_0001649 expression predicts better overall survival and serves as an independent prognostic indicator. Functionally, hsa_circ_0001649 overexpression suppresses PDAC cell proliferation and colony formation while promoting apoptosis, potentially involving caspase-3 and caspase-9 activation.

Confidence score:

0.6527

Other information
Title:

A novel prognostic biomarker for pancreatic ductal adenocarcinoma: hsa_circ_0001649.

Journal: Gene
Published: 2018
PubMed ID: 29969694
Study type:

combined biological and clinical study

Data availability: -
Code availability: -