circRNA basic information
circBase ID: hsa_circ_0002504
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr17:77073511-77077155:+
Genomic location(hg38): chr17:79077429-79081073:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

cancerous samples; adjacent non-cancerous samples

Cell lines:

GES-1; HGC-27; AGS; MKN-45

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: EPHA4, KCNA1, NCAM1
Associated microRNA: hsa-miR-615-5p, hsa-miR-767-5p
Biological function: Suppresses the migration and invasion ability of gastric cancer cells.
Molecular mechanism: hsa_circ_0002504 may inhibit gastric cancer progression via a ceRNA network by down-regulating hsa-miR-615-5p and hsa-miR-767-5p and up-regulating EPHA4, KCNA1, and NCAM1.
Biological pathway or process:

ceRNA regulation (other); migration (inhibits); invasion (inhibits)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Transfection; Transwell Assay; Western Blot; Bioinformatics Analysis

Clinical significance:

Hsa_circ_0002504 is a potential diagnostic biomarker for GC.

Description:

hsa_circ_0002504 was down-regulated in gastric cancer datasets and cell lines and was experimentally validated by qRT-PCR. Its overexpression reduced migration and invasion of AGS and HGC-27 cells, possibly through a ceRNA mechanism involving hsa-miR-615-5p/hsa-miR-767-5p and EPHA4, KCNA1, and NCAM1. The study proposes hsa_circ_0002504 as a potential diagnostic biomarker and therapeutic target for GC.

Confidence score:

0.4852

Other information
Title:

Comprehensive analysis of circular RNA-associated competing endogenous RNA networks and immune infiltration in gastric cancer.

Journal: Transplant immunology
Published: 2023
PubMed ID: 36773765
Study type:

combined biological and bioinformatics study

Data availability: GSE83521; GSE100170; TCGA; https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE83521; https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE100170; https://portal.gdc.cancer.gov/
Code availability: -