circRNA basic information
circBase ID: hsa_circ_0006773
Name: hsa_circ_HIBADH
Synonym: circHIBADH
Host Gene: HIBADH
Genomic location(hg19): chr7:27668989-27689252:-
Genomic location(hg38): chr7:27629370-27649633:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0008315
MONDO name: prostate cancer
Disease details: prostate cancer / PCa
Disease DO ID:
10283
Disease MeSH ID:
D011471
Disease NCIt ID:
C7378
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

PCa tumor tissue; adjacent normal tissue

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: HNRNPA1, HNRNPM, eIF4A3, PTBP1, ELAVL1, HNRNPD, AGO2
Associated microRNA: -
Biological function: Acts as a protein sponge inhibiting RNA splicing-associated RBPs (notably HNRNPA1); reduced circHIBADH is linked to enhanced carcinogenesis-related programs.
Molecular mechanism: rs11973492 may reduce circHIBADH generation by altering RNA secondary structure; circHIBADH sponges RBPs including HNRNPA1 to inhibit RNA splicing, influencing downstream oncogenic hallmarks.
Biological pathway or process:

ceRNA regulation (other); proliferation (promotes); cell cycle (promotes); other pathway/process (other)

Detected method:
S
Validation methods:

RNA-seq; Bioinformatics Analysis; Cohort Study

Clinical significance:

rs11973492 in circHIBADH was significantly associated with increased prostate cancer risk (dominant model).

Description:

circHIBADH is down-regulated in prostate cancer tumors versus adjacent normal tissue and is proposed to function as a protein sponge for RNA splicing-associated RBPs, especially HNRNPA1. The risk variant rs11973492 may reduce circHIBADH biogenesis by altering RNA secondary structure, weakening RBP sponging and thereby facilitating RNA-splicing-linked carcinogenic programs (e.g., MYC target, DNA repair, E2F target).

Confidence score:

0.348

Other information
Title:

Genetic variation of circHIBADH enhances prostate cancer risk through regulating HNRNPA1-related RNA splicing.

Journal: Journal of biomedical research
Published: 2024
PubMed ID: 38808547
Study type:

combined biological and clinical study

Data availability: PLCO (NIH-CDAS https://cdas.cancer.gov/datasets/plco/20/); MiOncoCirc (https://mioncocirc.github.io/); TCGA-PRAD (https://portal.gdc.cancer.gov/); GSE94767; GSE183019; https://www.prostatecellatlas.org/
Code availability: -