circRNA basic information
circBase ID: -
Name: -
Synonym: circSPECC1
Host Gene: SPECC1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: ATG4B, RNF5, ELAVL1
Associated microRNA: -
Biological function: Promotes ATG4B liquid-liquid phase separation and RNF5-mediated ubiquitination, downregulates ATG4B, promotes anoikis, and suppresses gastric cancer metastasis/anoikis resistance.
Molecular mechanism: circSPECC1 binds ATG4B and promotes ATG4B LLPS, acting as a scaffold to enhance ATG4B interaction with E3 ligase RNF5, thereby promoting ubiquitin-dependent degradation of ATG4B; ELAVL1 binds m6A-modified circSPECC1 and inhibits its expression.
Biological pathway or process:

autophagy (inhibits); metastasis (inhibits); apoptosis (promotes); other pathway/process (promotes); ubiquitination (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RIP (RNA Immunoprecipitation); RT-qPCR; RNA Pull-Down; Bioinformatics Analysis; Transfection; In Vivo Animal Model

Clinical significance:

-

Description:

In gastric cancer cells, circSPECC1 is down-regulated and functions as an ATG4B-binding circRNA that promotes ATG4B LLPS and RNF5-mediated ubiquitination, thereby reducing ATG4B protein levels to promote anoikis and suppress metastasis. ELAVL1 acts as an m6A reader that binds circSPECC1 and inhibits its expression, while lopinavir restores circSPECC1 abundance and suppresses GC metastasis.

Confidence score:

0.6157

Other information
Title:

CircRNA regulates the liquid-liquid phase separation of ATG4B, a novel strategy to inhibit cancer metastasis?

Journal: Cell stress
Published: 2024
PubMed ID: 38803355
Study type:

biological research

Data availability: -
Code availability: -