circRNA basic information
circBase ID: hsa_circ_0050547
Name: hsa_circ_UBA2
Synonym: circ50547
Host Gene: UBA2
Genomic location(hg19): chr19:34941169-34957919:+
Genomic location(hg38): chr19:34450264-34467014:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; serum; serum exosomes; plasma exosomes

Cell lines:

HGC-27; AGS; MKN-45; GES-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: HNF1B
Associated microRNA: miR-217
Biological function: promotes proliferation, migration, invasion, EMT, stemness and drug resistance; inhibits apoptosis (under Oxaliplatin treatment)
Molecular mechanism: ceRNA mechanism: circ50547 sponges miR-217 to upregulate HNF1B expression, promoting gastric cancer progression
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); EMT (promotes); stemness (promotes); chemoresistance (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Western Blot; Flow Cytometry(Non-apoptosis/cycle); In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); ROC Analysis; Survival Analysis; Bioinformatics Analysis

Clinical significance:

Exosomal circ50547 shows high diagnostic effect for GC (AUC 0.90) and is suggested as a biomarker for diagnosis and prognosis prediction

Description:

Exosomal circ50547 (hsa_circ_0050547, from UBA2) is upregulated in gastric cancer tissues and in patient serum exosomes and shows strong diagnostic performance in exosomes. Functionally, circ50547 promotes GC cell proliferation, migration/invasion, EMT, stemness and Oxaliplatin resistance by sponging miR-217 to upregulate HNF1B, enhancing tumor growth in a cell line-derived xenograft model.

Confidence score:

0.8584

Other information
Title:

Exosomal circ50547 as a potential marker and promotor of gastric cancer progression via miR-217/HNF1B axis.

Journal: Translational oncology
Published: 2024
PubMed ID: 38692196
Study type:

combined biological and clinical study

Data availability: GSE89143; GSE78092
Code availability: -