circRNA basic information
circBase ID: -
Name: hsa_circ_CDYl2
Synonym: circCDYL2
Host Gene: CDYL2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0015459
MONDO name: nasopharyngeal carcinoma
Disease details: nasopharyngeal carcinoma / NPC
Disease DO ID:
9261
Disease MeSH ID:
D00007727; D000077274
Disease NCIt ID:
C3871
Disease ICD11 ID:
1883313543
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

nasopharyngeal carcinoma tissues; nasopharyngeal epithelium (NPE) tissues; paraffin-embedded tissue section samples

Cell lines:

HNE2; CNE2; CNE2-IR; DR-GFP-U2OS; EJ5-GFP-U2OS

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: EIF3D, RAD51 mRNA
Associated microRNA: -
Biological function: promotes radiotherapy resistance and enhances DNA double-strand break repair via homologous recombination
Molecular mechanism: acts as a scaffold to recruit EIF3D to RAD51 mRNA 5′-UTR, promoting RAD51 translation initiation and enhancing homologous recombination repair
Biological pathway or process:

homologous recombination repair (promotes); ceRNA regulation (other); DNA damage repair (other); drug resistance (promotes)

Detected method:
Q
H
S
Validation methods:

RNA-seq; Sanger Sequencing; Actinomycin D / DRB Stability Assay; RNase R Treatment; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; RT-qPCR; ISH (In Situ Hybridization); Clinical Sample Validation; Transfection; Colony Formation Assay; IF (Immunofluorescence); Western Blot; Flow Cytometry(Non-apoptosis/cycle); RIP (RNA Immunoprecipitation); circRIP; RNA Pull-Down; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Bioinformatics Analysis; Survival Analysis

Clinical significance:

high circCDYL2 expression is associated with poor prognosis and lower overall survival in NPC

Description:

circCDYL2 is up-regulated in nasopharyngeal carcinoma and correlates with poor overall survival and radiotherapy resistance. Mechanistically, it acts as a scaffold binding EIF3D and RAD51 mRNA to promote RAD51 translation initiation, enhancing homologous recombination repair and radioresistance.

Confidence score:

0.89

Other information
Title:

CircCDYL2 bolsters radiotherapy resistance in nasopharyngeal carcinoma by promoting RAD51 translation initiation for enhanced homologous recombination repair.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2024
PubMed ID: 38654320
Study type:

combined biological and clinical study

Data availability: PRJNA391554; GSE12452; GSE53819; GSE64634; GSE61218; 10.1186/s13046-024-03049-0
Code availability: -