circRNA basic information
circBase ID: hsa_circ_0002874
Name: -
Synonym: circ_0002874
Host Gene: -
Genomic location(hg19): chr9:4286037-4286523:-
Genomic location(hg38): chr9:4286037-4286523:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

SMMC7721/S; Huh7/S; SMMC7721; Huh7

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: PRCD, MPDU1, LGALS4, NAA10, TGFBR3, SEMA6B, ZNF672, HIST1H1D, WIPF2, RTL8A
Associated microRNA: miR-27a-5p
Biological function: promotes sorafenib resistance; promotes metabolic reprogramming; promotes EMT
Molecular mechanism: ceRNA network where circ_0002874 targets miR-27a-5p to regulate downstream mRNAs; linked to Hippo signaling activation and EMT/metabolic reprogramming
Biological pathway or process:

Hippo/YAP (promotes); EMT (promotes); ceRNA regulation (other); other pathway/process (other)

Detected method:
S
Validation methods:

RNA-seq; Bioinformatics Analysis

Clinical significance:

-

Description:

circ_0002874 is downregulated in sorafenib-resistant HCC cells and is placed in a ceRNA network where it targets miR-27a-5p to affect downstream mRNAs. Network-level enrichment links this axis to Hippo signaling activation and to processes related to metabolic reprogramming and EMT that may contribute to sorafenib resistance.

Confidence score:

0.1768

Other information
Title:

Deciphering the role of non-coding RNAs involved in sorafenib resistance.

Journal: Heliyon
Published: 2024
PubMed ID: 38644890
Study type:

biological research; bioinformatics study

Data availability: available from the corresponding author upon a reasonable request; https://doi.org/10.1016/j.heliyon.2024.e29374
Code availability: -