circRNA basic information
circBase ID: hsa_circ_0003028
Name: hsa_circ_FUT8
Synonym: circ_0003028
Host Gene: FUT8
Genomic location(hg19): chr14:66028054-66028484:+
Genomic location(hg38): chr14:65561336-65561766:+
Subcellular localization: exosome
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; normal para-carcinoma healthy tissues; tumor tissues; adjacent normal tissues; plasma; serum exosomes; xenograft tumor tissues

Cell lines:

THLE-3; Huh-7; HuH-7; HCCLM3

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: ODC1, ornithine decarboxylase 1
Associated microRNA: miR-498
Biological function: promotes HCC cell proliferation, migration, invasion, metastasis, EMT and tumor growth; inhibits apoptosis
Molecular mechanism: circ_0003028 acts as a ceRNA sponge for miR-498 to regulate ODC1 expression and can be encapsulated in exosomes to promote EMT
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); metastasis (promotes); EMT (promotes); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

RNase R Treatment; RT-qPCR; Microarray; Clinical Sample Validation; RNA Pull-Down; Luciferase Reporter Assay; Transfection; MTT; EdU Staining; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; Wound Healing Assay; Western Blot; In Vivo Animal Model; IHC (Immunohistochemistry); Bioinformatics Analysis

Clinical significance:

promising biomarker and therapeutic target for HCC

Description:

circ_0003028 is up-regulated in HCC tissues, cells and patient plasma/serum exosomes. It promotes HCC proliferation, migration, invasion, EMT and in vivo tumor growth while suppressing apoptosis, mainly through a circ_0003028/miR-498/ODC1 ceRNA axis and exosome-mediated EMT promotion. The study suggests circ_0003028 may serve as a biomarker and therapeutic target for HCC.

Confidence score:

0.8175

Other information
Title:

Circular RNA circ_0003028 regulates cell development through modulating miR-498/ornithine decarboxylase 1 axis in hepatocellular carcinoma.

Journal: Anti-cancer drugs
Published: 2023
PubMed ID: 36730287
Study type:

combined biological and clinical study

Data availability: GSE78520
Code availability: -