circRNA basic information
circBase ID: hsa_circ_0044569
Name: hsa_circ_COL1A1
Synonym: circCOL1A1
Host Gene: COL1A1
Genomic location(hg19): chr17:48276916-48277308:-
Genomic location(hg38): chr17:50199555-50199947:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0015459
MONDO name: nasopharyngeal carcinoma
Disease details: nasopharyngeal carcinoma / NPC
Disease DO ID:
9261
Disease MeSH ID:
D00007727; D000077274
Disease NCIt ID:
C3871
Disease ICD11 ID:
1883313543
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NPC tissues; normal nasopharyngeal epithelial tissues

Cell lines:

SNU46; SUNE1; CNE-1; HONE-1; 6-10B; NP-69

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: PTMA, Ago2
Associated microRNA: miR-370-5p
Biological function: Promotes NPC cell proliferation, migration, invasion and Warburg effect; inhibits apoptosis.
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-370-5p to modulate PTMA expression, supporting glycolysis-related phenotypes.
Biological pathway or process:

glycolysis (promotes); proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; divergent primers PCR; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); Transfection; MTT; Colony Formation Assay; Transwell Assay; Annexin V/PI Flow Cytometry; Western Blot; Clinical Sample Validation; Bioinformatics Analysis

Clinical significance:

High circCOL1A1 expression is significantly associated with lymph node metastasis and advanced TNM stage in NPC.

Description:

circCOL1A1 (hsa_circ_0044569) is up-regulated in nasopharyngeal carcinoma tissues and NPC cell lines and is mainly localized in the cytoplasm. It promotes proliferation, migration, invasion and glycolysis/Warburg-effect phenotypes and inhibits apoptosis by sponging miR-370-5p to modulate PTMA in a circCOL1A1/miR-370-5p/PTMA axis. High circCOL1A1 expression correlates with lymph node metastasis and advanced TNM stage.

Confidence score:

0.8275

Other information
Title:

Circular RNA COL1A1 promotes Warburg effect and tumor growth in nasopharyngeal carcinoma.

Journal: Discover oncology
Published: 2024
PubMed ID: 38619648
Study type:

combined biological and clinical study

Data availability: The datasets used and/or analyzed during the present study are available from the corresponding author on reasonable request.
Code availability: -