circRNA basic information
circBase ID: hsa_circ_0007142
Name: hsa_circ_DOCK1
Synonym: -
Host Gene: DOCK1
Genomic location(hg19): chr10:128768965-128788867:+
Genomic location(hg38): chr10:126970701-126990603:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent paracancerous tissues / pericancerous tissues

Cell lines:

HCT-116; HT-29; LoVo; HCO

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: miR-103a-2-5p
Biological function: Promotes proliferation, migration, and invasion of colorectal cancer cells.
Molecular mechanism: Targets (sponges) miR-103a-2-5p as a miRNA sponge mechanism in CRC cells.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Sanger Sequencing; Clinical Sample Validation; Luciferase Reporter Assay; Transfection; CCK8; Colony Formation Assay; Transwell Assay

Clinical significance:

Upregulation was associated with poor differentiation and lymphatic metastasis of CRC.

Description:

hsa_circ_0007142 (derived from DOCK1) is up-regulated in colorectal cancer tissues and in CRC cell lines (HCT-116 and HT-29). It promotes malignant phenotypes (proliferation, migration, invasion) and directly targets miR-103a-2-5p, consistent with a miRNA-sponge/ceRNA-like mechanism; clinically, higher expression associates with poor differentiation and lymphatic metastasis.

Confidence score:

0.7177

Other information
Title:

Circular RNA hsa_circ_0007142 Is Upregulated and Targets miR-103a-2-5p in Colorectal Cancer.

Journal: Journal of oncology
Published: 2019
PubMed ID: 31346335
Study type:

combined biological and clinical study

Data availability: All data are available upon request.
Code availability: -