circRNA basic information
circBase ID: hsa_circ_0013958
Name: hsa_circ_ACP6
Synonym: circ_0013958
Host Gene: ACP6
Genomic location(hg19): chr1:147131074-147131890:-
Genomic location(hg38): chr1:147658959-147659775:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005061
MONDO name: lung adenocarcinoma
Disease details: lung adenocarcinoma / LUAD
Disease DO ID:
3910
Disease MeSH ID:
C538231
Disease NCIt ID:
C3512
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

LAC tissue samples; adjacent normal tissues; plasma

Cell lines:

A549; H1299; HEK-293T; BEAS-2B

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: cyclin D1, CCND1
Associated microRNA: miR-134 / miR-134-5p
Biological function: Promotes LAC cell proliferation, migration and invasion; inhibits cell apoptosis; associated with TNM stage and lymphatic metastasis; potential non-invasive biomarker for early detection and screening of LAC.
Molecular mechanism: hsa_circ_0013958 acts as a cytoplasmic miR-134 sponge and up-regulates oncogenic CCND1/cyclin D1 protein in LAC cells.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); apoptosis (inhibits); metastasis (promotes); ceRNA regulation (other)

Detected method:
Q
M
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; RT-qPCR; Microarray; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Transwell Assay; Western Blot; ROC Analysis; Bioinformatics Analysis

Clinical significance:

hsa_circ_0013958 levels were associated with TNM stage and lymphatic metastasis, and showed diagnostic accuracy for LAC with tissue AUC 0.815 and plasma AUC 0.794; it may serve as a potential non-invasive biomarker for early detection and screening of LAC.

Description:

hsa_circ_0013958 is up-regulated in LAC tissues, cell lines and plasma, and its expression is associated with TNM stage and lymphatic metastasis. Functionally, it promotes proliferation, migration and invasion while inhibiting apoptosis in LAC cells. Mechanistically, cytoplasmic hsa_circ_0013958 sponges miR-134 and up-regulates oncogenic CCND1/cyclin D1, supporting its value as a potential non-invasive biomarker for LAC detection.

Confidence score:

0.8419

Other information
Title:

hsa_circ_0013958: a circular RNA and potential novel biomarker for lung adenocarcinoma.

Journal: The FEBS journal
Published: 2017
PubMed ID: 28685964
Study type:

combined biological and clinical study

Data availability: Table S2; Table S3; Table S4; Table S5; circBase; STARBASE, version 2.0
Code availability: -