circRNA basic information
circBase ID: hsa_circ_0085360
Name: hsa_circ_TRPS1
Synonym: -
Host Gene: TRPS1
Genomic location(hg19): chr8:116599227-116617229:-
Genomic location(hg38): chr8:115587000-115605002:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma / OS
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

HUO3N1; CAL78; hFOB1.19; NOS1; U2OS; HOS

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DS
Associated gene: TRPS1, FGFR3, 73 mRNAs
Associated microRNA: hsa-miR-99a-5p, hsa-miR-100-5p, hsa-miR-99b-5p
Biological function: Potentially participates in osteosarcoma metastasis and may have prognostic value for OS through correlation with TRPS1 and downstream FGFR3.
Molecular mechanism: circRNA-based competing endogenous RNA network involving miRNAs and mRNAs; correlation with host gene TRPS1 and downstream target gene FGFR3
Biological pathway or process:

ceRNA regulation (other); metastasis (other); mTOR signaling pathway (other); stemness (other); drug resistance (other)

Detected method:
S
Validation methods:

RNA-seq; Bioinformatics Analysis

Clinical significance:

hsa_circ_0085360 might have the potential to predict the OS prognosis.

Description:

hsa_circ_0085360 was identified as a metastasis-related osteosarcoma circRNA in a predicted ceRNA network. It showed the strongest correlation with its host gene TRPS1, and its downstream target FGFR3 and TRPS1 were associated with event-free and overall survival, suggesting potential prognostic relevance.

Confidence score:

0.1768

Other information
Title:

Comprehensive characterization of circular RNAs in osteosarcoma cell lines.

Journal: Cellular signalling
Published: 2020
PubMed ID: 32199934
Study type:

bioinformatics study

Data availability: SRP157750; TARGET database; Supplementary data: https://doi.org/10.1016/j.cellsig.2020.109603
Code availability: -