circRNA basic information
circBase ID: hsa_circ_0085769
Name: hsa_circ_PTK2
Synonym: -
Host Gene: PKT-2
Genomic location(hg19): chr8:141856358-141889736:-
Genomic location(hg38): chr8:140846259-140879637:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005545
MONDO name: staphylococcus aureus infection
Disease details: intracellular Staphylococcus aureus infection
Disease DO ID:
-
Disease MeSH ID:
-
Disease NCIt ID:
C122576
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

Hfob1.19

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: PTK2
Associated microRNA: hsa-miR-6886-5p, hsa-miR-6812-3p, hsa-miR-6769b-5p, hsa-miR-6765-5p, hsa-miR-182-5p
Biological function: may play a positive regulatory role in epithelial cell signaling upon bacterial invasion
Molecular mechanism: predicted miRNA sponge (ceRNA-like) via binding to hsa-miR-6886-5p and other miRNAs
Biological pathway or process:

bacterial invasion of epithelial cells (other); ceRNA regulation (other)

Detected method:
S
Validation methods:

RNA-seq; Bioinformatics Analysis

Clinical significance:

suggesting that they may serve as reliable biomarkers

Description:

hsa_circ_0085769 is reported as up-regulated in S. aureus-infected human osteoblasts by RNA-seq and is predicted to act as a miRNA-binding circRNA. It is positively correlated with PTK2 and is proposed to influence bacterial-invasion-related signaling via miRNAs such as hsa-miR-6886-5p.

Confidence score:

0.1768

Other information
Title:

Intracellular Staphylococcus aureus infection in human osteoblasts: circRNA expression analysis.

Journal: Heliyon
Published: 2024
PubMed ID: 38560264
Study type:

biological research

Data availability: GSE217234
Code availability: -