circRNA basic information
circBase ID: -
Name: hsa_circ_ZFR
Synonym: hsa_circRNA_103809
Host Gene: ZFR
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; matched adjacent non-cancerous tissues; normal colorectal tissues

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: hsa-miR-511-5p, hsa-miR-130b-5p, hsa-miR-642a-5p, hsa-miR-532-3p, hsa-miR-329-5p
Biological function: Potentially involved in colorectal cancer development and tumor progression; lower expression was associated with lymph node metastasis and TNM stage; may serve as a diagnostic biomarker.
Molecular mechanism: Putative miRNA sponge mechanism based on predicted miRNA binding sites.
Biological pathway or process:

ceRNA regulation (other); metastasis (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Lower expression was associated with poor prognosis of CRC; AUC for discriminating CRC was 0.699.

Description:

hsa_circRNA_103809 was significantly down-regulated in colorectal cancer tissues and its lower expression was associated with lymph node metastasis and TNM stage. The study suggests that it may serve as a diagnostic biomarker and may function through a putative circRNA-miRNA sponge mechanism.

Confidence score:

0.6556

Other information
Title:

Identification of differentially expressed circular RNAs in human colorectal cancer.

Journal: Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine
Published: 2017
PubMed ID: 28349836
Study type:

combined biological and clinical study

Data availability: -
Code availability: -