circRNA basic information
circBase ID: -
Name: hsa_circ_NOTCH1
Synonym: Circ-NOTCH1 / circNOTCH1
Host Gene: NOTCH1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

cancerous tissues; paired normal tissues; metastatic GC tissues

Cell lines:

GES-1; AGS; BGC-823; MGC-803; SGC-7901; MKN-45

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MYC, NOTCH1, Ago2
Associated microRNA: miR-449c-5p
Biological function: Promotes GC cell migration, invasion, tumor growth, metastasis and stemness; circ-NOTCH1 knockdown inhibits migration, invasion, spheroid formation, side population ratio and stemness-related protein expression.
Molecular mechanism: Circ-NOTCH1 functions as a miR-449c-5p sponge to regulate MYC, and MYC transcriptionally activates NOTCH1 and circ-NOTCH1, forming a circ-NOTCH1/miR-449c-5p/MYC/NOTCH1 regulatory axis.
Biological pathway or process:

Notch (promotes); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); stemness (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; ChIP / ChIP-seq; Transfection; Transwell Assay; Flow Cytometry(Non-apoptosis/cycle); Western Blot; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circ-NOTCH1 level is correlated with unfavorable prognosis of patients with GC; circ-NOTCH1 may be a therapeutic marker or target for GC.

Description:

Circ-NOTCH1 is an up-regulated NOTCH1-derived circRNA in gastric cancer and high expression is associated with unfavorable prognosis. It promotes GC growth, migration, invasion, metastasis and stemness by sponging miR-449c-5p to regulate MYC and NOTCH1, forming a circ-NOTCH1/miR-449c-5p/MYC/NOTCH1 regulatory axis.

Confidence score:

0.8816

Other information
Title:

miR-449c-5p availability is antagonized by circ-NOTCH1 for MYC-induced NOTCH1 upregulation as well as tumor metastasis and stemness in gastric cancer.

Journal: Journal of cellular biochemistry
Published: 2020
PubMed ID: 31943342
Study type:

combined biological and clinical study

Data availability: -
Code availability: -