circRNA basic information
circBase ID: hsa_circ_0002874
Name: hsa_circ_GLIS3
Synonym: circGLIS3
Host Gene: GLIS3
Genomic location(hg19): chr9:4286037-4286523:-
Genomic location(hg38): chr9:4286037-4286523:-
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; paired adjacent normal tissues

Cell lines:

GES-1; AGS; MKN1; SGC-7901; MKN-45; HGC-27; BGC-823; THP-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PGK1, VIMENTIN, EIF4A3
Associated microRNA: miR-1343-3p
Biological function: Promotes GC cell proliferation, migration, invasion, tumor growth and metastasis; promotes macrophage M2 polarization.
Molecular mechanism: Acts as a miRNA sponge for miR-1343-3p to upregulate PGK1 and activate PI3K/AKT signaling; binds VIMENTIN to reduce Ser83 phosphorylation; packaged into exosomes to mediate cell-cell communication; EIF4A3 promotes circGLIS3 biogenesis by binding flanking sequences of GLIS3 pre-mRNA.
Biological pathway or process:

PI3K/AKT (promotes); proliferation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); EMT (promotes); macrophage polarization (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; FISH / smFISH; Clinical Sample Validation; RNA Pull-Down; circRIP; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; Western Blot; CCK8; EdU Staining; Transwell Assay; Wound Healing Assay; In Vivo Animal Model; H&E Staining; Bioinformatics Analysis

Clinical significance:

High circGLIS3 expression was associated with advanced TNM stage and lymph node metastasis in GC patients.

Description:

circGLIS3 (hsa_circ_0002874) is up-regulated in gastric cancer and promotes tumor growth and metastasis. It sponges miR-1343-3p to upregulate PGK1 and activate PI3K/AKT signaling, and it also binds VIMENTIN to reduce Ser83 phosphorylation. circGLIS3 is transported via exosomes to neighboring cancer cells and macrophages, enhancing invasion and inducing M2 polarization; EIF4A3 promotes its biogenesis.

Confidence score:

0.8546

Other information
Title:

CircGLIS3 promotes gastric cancer progression by regulating the miR-1343-3p/PGK1 pathway and inhibiting vimentin phosphorylation.

Journal: Journal of translational medicine
Published: 2024
PubMed ID: 38459513
Study type:

combined biological and clinical study

Data availability: GSE193453
Code availability: -