circRNA basic information
circBase ID: hsa_circ_0006220
Name: hsa_circ_TADA2A
Synonym: -
Host Gene: TADA2A
Genomic location(hg19): chr17:35800605-35800763:+
Genomic location(hg38): chr17:37440504-37440662:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007254
MONDO name: breast cancer
Disease details: breast cancer
Disease DO ID:
1612
Disease MeSH ID:
-
Disease NCIt ID:
C9335
Disease ICD11 ID:
1047754165
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

breast cancer tissues; paired noncancerous tissues; fresh breast cancer lesions

Cell lines:

MDA-MB-231

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: miR-197-5p
Biological function: May play a role in human breast cancer; associated with histological type and lymph node metastasis; may serve as a potential tumor marker for breast cancer screening.
Molecular mechanism: hsa_circ_0006220 may regulate miR-197-5p, suggesting a possible miRNA sponge or ceRNA-related mechanism.
Biological pathway or process:

ceRNA regulation (other); metastasis (other)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis; Transfection

Clinical significance:

Downregulated hsa_circ_0006220 was inversely correlated with histological type and lymph node metastasis; ROC AUC was 0.706; may be a potential biomarker or tumor marker for breast cancer screening.

Description:

hsa_circ_0006220 is significantly downregulated in human breast cancer tissues and its lower expression is associated with histological type and lymph node metastasis. The study suggests that hsa_circ_0006220 may act through regulation of miR-197-5p and may serve as a potential biomarker for breast cancer screening.

Confidence score:

0.5849

Other information
Title:

Downregulation of hsa_circ_0006220 and its correlation with clinicopathological factors in human breast cancer.

Journal: Gland surgery
Published: 2021
PubMed ID: 33708563
Study type:

combined biological and clinical study

Data availability: Data Sharing Statement: Available at http://dx.doi.org/10.21037/gs-21-42
Code availability: -