circRNA basic information
circBase ID: hsa_circ_0000567
Name: hsa_circ_SETD3
Synonym: -
Host Gene: SETD3
Genomic location(hg19): chr14:99924615-99932150:-
Genomic location(hg38): chr14:99458278-99465813:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent noncancerous tissues; human blood exosome

Cell lines:

FHC; SW480; RKO; CACO2; SW620; HCT116

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: -
Associated microRNA: -
Biological function: Hsa_circ_0000567 acts as a suppressor in CRC; decreased expression is associated with tumor growth and metastasis, and knockdown promotes CRC cell proliferation and migration in vitro.
Molecular mechanism: The molecular mechanism was not experimentally uncovered; the study suggests possible post-transcriptional regulation as a future direction.
Biological pathway or process:

proliferation (inhibits); migration (inhibits); metastasis (inhibits)

Detected method:
Q
Validation methods:

Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; RT-qPCR; Clinical Sample Validation; Transfection; MTT; Transwell Assay; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Decreased hsa_circ_0000567 expression is negatively correlated with tumor size, lymph metastasis, distal metastasis, and TNM stage; ROC analysis showed AUC = 0.8653, indicating diagnostic biomarker potential for CRC.

Description:

Hsa_circ_0000567 is a SETD3-derived circular RNA that is significantly downregulated in colorectal cancer tissues and cell lines. Its reduced expression is associated with larger tumors, metastasis, and advanced TNM stage, while knockdown promotes CRC cell proliferation and migration, supporting a tumor-suppressive role. ROC analysis suggests hsa_circ_0000567 has potential diagnostic biomarker value for CRC.

Confidence score:

0.7729

Other information
Title:

Circular RNA hsa_circ_0000567 can be used as a promising diagnostic biomarker for human colorectal cancer.

Journal: Journal of clinical laboratory analysis
Published: 2018
PubMed ID: 29333615
Study type:

combined biological and clinical study

Data availability: exoRBase; Figure S1
Code availability: -