circRNA basic information
circBase ID: hsa_circ_0023984
Name: hsa_circ_NOX4
Synonym: circ_0023984 / circRNA_0023984
Host Gene: NOX4
Genomic location(hg19): chr11:89133184-89135710:-
Genomic location(hg38): chr11:89400016-89402542:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005580
MONDO name: esophageal squamous cell carcinoma
Disease details: esophageal squamous cell carcinoma / ESCC
Disease DO ID:
3748
Disease MeSH ID:
C562729; D000077277
Disease NCIt ID:
C4024
Disease ICD11 ID:
1417891145
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

ESCC tissues; paraneoplastic tissues / para-cancerous tissues

Cell lines:

KYSE30; KYSE150; KYSE410; EC109; EC9706; EC9706; EC109; EC9706; SHEE; EC9706; EC109; EC109; EC9706; KYSE30; KYSEE150; KYSE410; EC109; EC9706; SHEE

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: CST4, Ago2
Associated microRNA: miR-134-5p
Biological function: promotes cell growth, invasion, migration and tumorigenesis in ESCC
Molecular mechanism: ceRNA sponging of miR-134-5p leading to increased CST4 expression; CST4-dependent oncogenic effects
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); tumorigenesis (promotes); ceRNA regulation (promotes)

Detected method:
Q
Validation methods:

Bioinformatics Analysis; RT-qPCR; RNase R Treatment; Nuclear-Cytoplasmic Fractionation; Transfection; Luciferase Reporter Assay; RNA Pull-Down; RIP (RNA Immunoprecipitation); Western Blot; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; In Vivo Animal Model; IHC (Immunohistochemistry); Survival Analysis; Clinical Sample Validation

Clinical significance:

High circ_0023984 expression was associated with poor overall survival in ESCC patients.

Description:

circ_0023984 is up-regulated in ESCC tissues/cell lines and acts as an oncogenic circRNA. It mainly localizes to the cytoplasm and sponges miR-134-5p, thereby de-repressing CST4 to promote ESCC proliferation, migration/invasion, and xenograft tumor growth; high expression correlates with worse overall survival.

Confidence score:

0.8489

Other information
Title:

CircRNA circ_0023984 promotes the progression of esophageal squamous cell carcinoma via regulating miR-134-5p/cystatin-s axis.

Journal: Bioengineered
Published: 2022
PubMed ID: 35440286
Study type:

combined biological and clinical study

Data availability: GSE131969; TCGA (Starbase online tool: http://starbase.sysu.edu.cn/); The data is available from the corresponding author upon reasonable request.
Code availability: -