circRNA basic information
circBase ID: -
Name: hsa_circ_VRK1
Synonym: circVRK1
Host Gene: VRK1
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

osteosarcoma tissues; matched adjacent noncancerous tissues

Cell lines:

U-2OS; MG-63; MNNG/HOS; Saos-2; 143B; hFOB1.19

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: ZNF652, AGO2
Associated microRNA: miR-337-3p
Biological function: Suppresses osteosarcoma cell proliferation, migration and invasion; suppresses tumor growth in vivo
Molecular mechanism: Acts as a miRNA sponge (ceRNA) for miR-337-3p to promote ZNF652 expression
Biological pathway or process:

proliferation (inhibits); migration (inhibits); invasion (inhibits); ceRNA regulation (other)

Detected method:
Q
B
Validation methods:

RT-qPCR; Northern Blot; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Sanger Sequencing; Clinical Sample Validation; Transfection; CCK8; Colony Formation Assay; Wound Healing Assay; Transwell Assay; In Vivo Animal Model; H&E Staining; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; Western Blot; Survival Analysis

Clinical significance:

down-regulation of circVRK1 in osteosarcoma tissues was related to poor outcome of patients; low expression of circVRK1 was associated with distant metastasis

Description:

circVRK1 is down-regulated in osteosarcoma and functions as a tumor suppressor by inhibiting proliferation, migration, invasion, and xenograft growth. Mechanistically, it acts as a ceRNA sponging miR-337-3p to increase ZNF652 expression, and low circVRK1 expression is associated with worse prognosis.

Confidence score:

0.8654

Other information
Title:

Circular RNA circVRK1 suppresses the proliferation, migration and invasion of osteosarcoma cells by regulating zinc finger protein ZNF652 expression via microRNA miR-337-3p.

Journal: Bioengineered
Published: 2021
PubMed ID: 34424826
Study type:

combined biological and clinical study

Data availability: The datasets used in the current study are available from the corresponding authors on reasonable request; Supplemental data for this article can be accessed here
Code availability: -