circRNA basic information
circBase ID: hsa_circ_0053442
Name: hsa_circ_BIRC6
Synonym: circBIRC6
Host Gene: BIRC6
Genomic location(hg19): chr2:32602655-32641231:+
Genomic location(hg38): chr2:32377587-32416163:+
Subcellular localization: nucleus and cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005184
MONDO name: pancreatic ductal adenocarcinoma
Disease details: pancreatic ductal adenocarcinoma / PDAC
Disease DO ID:
3498, 3587
Disease MeSH ID:
D021441
Disease NCIt ID:
C9120
Disease ICD11 ID:
581089833
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

primary tumor tissues; plasma EVs

Cell lines:

Panc-1; MiaPaCa-2; Bxpc3

In vivo animal model:

cell line-derived xenograft; patient-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: XRCC4, SUMO1, SAE1, EIF4A3
Associated microRNA: -
Biological function: promotes oxaliplatin (platinum) resistance/chemoresistance in PDAC; enhances NHEJ-dependent DNA repair; attenuates oxaliplatin-induced apoptosis
Molecular mechanism: EV-delivered circBIRC6 binds XRCC4 and facilitates SUMO1-mediated SUMOylation of XRCC4 (K115), enhancing XRCC4 chromatin/nuclear localization and NHEJ repair, leading to oxaliplatin resistance; EIF4A3 promotes circBIRC6 biogenesis
Biological pathway or process:

NHEJ (promotes); DNA repair (promotes); apoptosis (inhibits); chemoresistance (promotes); other pathway/process (promotes)

Detected method:
Q
H
S
Validation methods:

RNA-seq; RT-qPCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Sanger Sequencing; Back-Splice Junction PCR / divergent primers PCR; FISH / smFISH; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; ISH (In Situ Hybridization); RIP (RNA Immunoprecipitation); RNA Pull-Down; Co-IP; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Western Blot; IF (Immunofluorescence); In Vivo Animal Model; IHC (Immunohistochemistry); TUNEL; Survival Analysis; Bioinformatics Analysis

Clinical significance:

High circBIRC6 is associated with oxaliplatin resistance and shorter PFS; plasma EV-packaged circBIRC6 may serve as a biomarker for oxaliplatin-based chemoresistance

Description:

In PDAC, CAF-derived extracellular vesicles deliver circBIRC6 to tumor cells, increasing oxaliplatin/platinum chemoresistance. circBIRC6 binds XRCC4 and promotes SUMO1-dependent SUMOylation at XRCC4 K115, enhancing XRCC4 chromatin/nuclear localization and NHEJ DNA repair, thereby reducing DNA damage and apoptosis. High (plasma EV or tissue) circBIRC6 correlates with oxaliplatin resistance and shorter PFS, supporting its value as a predictive biomarker and therapeutic target (e.g., ASO-circBIRC6 in PDX).

Confidence score:

0.8941

Other information
Title:

Extracellular vesicle-packaged circBIRC6 from cancer-associated fibroblasts induce platinum resistance via SUMOylation modulation in pancreatic cancer.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2023
PubMed ID: 38012734
Study type:

combined biological and clinical study

Data availability: GSE172096
Code availability: -