circRNA basic information
circBase ID: hsa_circ_0009092
Name: hsa_circ_OGDH
Synonym: circ_0009092 / circRNA_0009092
Host Gene: OGDH
Genomic location(hg19): chr7:44739739-44741214:+
Genomic location(hg38): chr7:44700140-44701615:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

CRC tissues; adjacent normal tissues (ANT); xenograft tumor tissues

Cell lines:

HCT-116; Lovo; THP-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: NLK, EIF4A3
Associated microRNA: miR-665
Biological function: inhibits proliferation, migration, invasion and EMT; inhibits TAM recruitment; suppresses tumor growth in vivo
Molecular mechanism: ceRNA sponge of miR-665 to upregulate NLK and suppress Wnt/beta-catenin signaling; circRNA biogenesis suppressed by EIF4A3 binding flanking sequences; downstream NLK-STAT3-CCL2 affects macrophage recruitment
Biological pathway or process:

Wnt/beta-catenin (inhibits); EMT (inhibits); proliferation (inhibits); migration (inhibits); invasion (inhibits); macrophage polarization (inhibits); immune regulation (inhibits); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

RT-qPCR; Microarray; Sanger Sequencing; RNase R Treatment; Back-Splice Junction PCR / divergent primers PCR; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; EdU Staining; Colony Formation Assay; Wound Healing Assay; Transwell Assay; Western Blot; ELISA; IHC (Immunohistochemistry); Flow Cytometry(Non-apoptosis/cycle); In Vivo Animal Model; Survival Analysis; Bioinformatics Analysis; Co-IP

Clinical significance:

low circ_0009092 expression was associated with poor overall survival (OS) and recurrence-free survival (RFS); circ_0009092 was an independent prognostic factor

Description:

In colorectal cancer, circ_0009092 is down-regulated and acts as a tumor suppressor by inhibiting proliferation, migration, invasion and EMT, and by reducing TAM recruitment. It functions mainly as a ceRNA that sponges miR-665 to increase NLK and inhibit Wnt/beta-catenin signaling; EIF4A3 suppresses its biogenesis, and the downstream NLK/STAT3/CCL2 module influences macrophage recruitment.

Confidence score:

0.8772

Other information
Title:

Hsa_circ_0009092/miR-665/NLK signaling axis suppresses colorectal cancer progression via recruiting TAMs in the tumor microenvironment.

Journal: Journal of experimental & clinical cancer research : CR
Published: 2023
PubMed ID: 38008713
Study type:

combined biological and clinical study

Data availability: available within the paper, its supplementary material files
Code availability: -