circRNA basic information
circBase ID: hsa_circ_0064656
Name: hsa_circ_TGFBR2
Synonym: -
Host Gene: TGFBR2
Genomic location(hg19): chr3:30713129-30715738:+
Genomic location(hg38): chr3:30671637-30674246:+
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005149
MONDO name: pulmonary hypertension
Disease details: pulmonary hypertension in COPD / COPD-PH
Disease DO ID:
6432
Disease MeSH ID:
D006976
Disease NCIt ID:
-
Disease ICD11 ID:
1496633964
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

lung tissues; serum

Cell lines:

HPAECs; HPASMCs

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DS
Associated gene: VCAM1, VCAN, THBS1
Associated microRNA: -
Biological function: May be involved in COPD-PH pathogenesis and potentially intercellular signal transduction between HPAECs and HPASMCs under hypoxia; related to proliferation, migration and EndMT.
Molecular mechanism: Potential ceRNA mechanism via predicted circRNA-miRNA-mRNA regulatory network.
Biological pathway or process:

proliferation (other); migration (other); EMT (other); NF-kappaB (other); TGF-beta/SMAD (other); MAPK (other); inflammation (other); ceRNA regulation (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

Potential biomarkers for COPD-PH.

Description:

hsa_circ_0064656 shows abnormal expression in COPD-PH: up-regulated in patient serum but decreases in hypoxic HPAECs while increasing in hypoxic HPASMCs. The study suggests it may participate in COPD-PH through a predicted ceRNA network and processes linked to proliferation, migration and EndMT, with enrichment in NF-kappaB, TGF-beta, MAPK and TNF signaling.

Confidence score:

0.4032

Other information
Title:

Expression Profiles of circRNAs and Identification of hsa_circ_0007608 and hsa_circ_0064656 as Potential Biomarkers for COPD-PH Patients.

Journal: International journal of chronic obstructive pulmonary disease
Published: 2023
PubMed ID: 37955024
Study type:

combined biological and clinical study

Data availability: PRJNA913650
Code availability: -