circRNA basic information
circBase ID: hsa_circ_0049271
Name: hsa_circ_KEAP1
Synonym: circ0049271
Host Gene: KEAP1
Genomic location(hg19): chr19:10610070-10610756:-
Genomic location(hg38): chr19:10499394-10500080:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

GES-1; TGES-1

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: WTAP, IGF2BP3, METTL3, METTL14
Associated microRNA: -
Biological function: Promotes proliferation, migration, invasion, and EMT in MNNG-induced malignant transformed gastric epithelial cells; promotes tumorigenesis in vivo.
Molecular mechanism: Activates TGFbeta/SMAD signaling; m6A modification mediated by WTAP; associated with increased IGF2BP3 level (IGF2BP3 predicted as binding protein).
Biological pathway or process:

TGF-beta/SMAD (promotes); proliferation (promotes); migration (promotes); invasion (promotes); EMT (promotes); m6A modification (other); other pathway/process (other)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Western Blot; In Vivo Animal Model

Clinical significance:

-

Description:

circ0049271 is up-regulated in MNNG-induced malignant transformation of gastric epithelial cells and promotes proliferation, migration, invasion and EMT. It activates TGFbeta/SMAD signaling, and its m6A modification is proposed to be mediated by WTAP with an IGF2BP3-associated mechanism.

Confidence score:

0.7006

Other information
Title:

The role of m6A modified circ0049271 induced by MNNG in precancerous lesions of gastric cancer.

Journal: Heliyon
Published: 2024
PubMed ID: 39224358
Study type:

combined biological and bioinformatics study

Data availability: GSE89143; GSE93541; https://doi.org/10.1016/j.heliyon.2024.e35654
Code availability: -