circRNA basic information
circBase ID: hsa_circ_0000098
Name: -
Synonym: -
Host Gene: -
Genomic location(hg19): chr1:101372407-101387397:+
Genomic location(hg38): chr1:100906851-100921841:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissues; para-carcinoma tissues; HCC tumor tissues; tumor and adjacent noncancerous specimens

Cell lines:

Hep3B; Huh7; MHCC97L; SK-hep1; THLE-21

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: MMP2, AGO2, MMP9, E-cadherin, N-cadherin
Associated microRNA: miR-136-5p
Biological function: Facilitates migration, invasion, metastasis and malignant progression of HCC; silencing hsa_circ_0000098 inhibits HCC cell migration and invasion.
Molecular mechanism: hsa_circ_0000098 functions as a ceRNA by sponging miR-136-5p and regulating the downstream target MMP2, thereby promoting HCC migration, invasion and metastasis.
Biological pathway or process:

ceRNA regulation (promotes); migration (promotes); invasion (promotes); metastasis (promotes); EMT (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Clinical Sample Validation; Nuclear-Cytoplasmic Fractionation; Bioinformatics Analysis; Luciferase Reporter Assay; RIP (RNA Immunoprecipitation); RNA Pull-Down; Transfection; Transwell Assay; Western Blot; Cohort Study; Survival Analysis

Clinical significance:

High expression of hsa_circ_0000098 is associated with poor prognosis and is closely related to tumor size, TNM stage, differentiation, and lymph node metastasis.

Description:

hsa_circ_0000098 is up-regulated in HCC tissues and cell lines, and high expression is associated with worse prognosis and aggressive clinicopathological features. Functionally, it promotes HCC cell migration, invasion, metastasis and malignant progression by acting as a cytoplasmic ceRNA that sponges miR-136-5p and regulates MMP2.

Confidence score:

0.814

Other information
Title:

Hsa-circ-0000098 promotes the progression of hepatocellular carcinoma by regulation of miR-136-5p/MMP2 axis.

Journal: Advances in clinical and experimental medicine : official organ Wroclaw Medical University
Published: 2023
PubMed ID: 36881359
Study type:

combined biological and clinical study

Data availability: GSE97332
Code availability: -