circRNA basic information
circBase ID: hsa_circ_0000066
Name: hsa_circ_RNF220
Synonym: circRNF220
Host Gene: RNF220
Genomic location(hg19): chr1:44890310-44890442:-
Genomic location(hg38): chr1:44424638-44424770:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0009807
MONDO name: osteosarcoma
Disease details: osteosarcoma / OS
Disease DO ID:
3347
Disease MeSH ID:
D012516
Disease NCIt ID:
C9145
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

OS tissue; healthy para-carcinoma tissue; tumor samples

Cell lines:

SaOS-2; HOS; hFOB1.19; 293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: METTL3, survivin, Ago2
Associated microRNA: miR-330-5p
Biological function: promotes osteosarcoma cell proliferation, migration, invasion and tumor growth
Molecular mechanism: METTL3-mediated m6A modification enhances circRNF220; circRNF220 acts as a sponge for miR-330-5p to upregulate survivin
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; RNase R Treatment; Actinomycin D / DRB Stability Assay; FISH / smFISH; MeRIP / MeRIP-seq; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; Wound Healing Assay; Western Blot; Nuclear-Cytoplasmic Fractionation; Clinical Sample Validation; In Vivo Animal Model; IHC (Immunohistochemistry); IF (Immunofluorescence); Bioinformatics Analysis

Clinical significance:

high expression of circRNF220 was associated with TNM stage and tumor size

Description:

circRNF220 is up-regulated in osteosarcoma tissues and cell lines and promotes proliferation, migration, invasion, and xenograft tumor growth. Mechanistically, METTL3-mediated m6A modification increases circRNF220, which sponges miR-330-5p to upregulate survivin.

Confidence score:

0.8817

Other information
Title:

METTL3-mediated m6A modification of circRNF220 modulates miR-330-5p/survivin axis to promote osteosarcoma progression.

Journal: Journal of cancer research and clinical oncology
Published: 2023
PubMed ID: 37838643
Study type:

combined biological and clinical study

Data availability: GSE140256
Code availability: -