circRNA basic information
circBase ID: -
Name: hsa_circ_UBXN7
Synonym: circUBXN7
Host Gene: UBXN7
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005016
MONDO name: diabetic kidney disease
Disease details: diabetic kidney disease / DKD
Disease DO ID:
-
Disease MeSH ID:
D003928
Disease NCIt ID:
C84417
Disease ICD11 ID:
615062102
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

plasma; kidney tissue; renal tissue

Cell lines:

HK-2; RAW264.7

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: IGF2BP2, SP1
Associated microRNA: -
Biological function: promotes macrophage activation/polarization, macrophage infiltration, EMT, renal fibrosis, and proteinuria in DKD
Molecular mechanism: circUBXN7 binds the m6A reader IGF2BP2 and forms an RNA-protein complex with IGF2BP2 and SP1 to enhance IGF2BP2-dependent SP1 mRNA stability; SP1 also transcriptionally upregulates circUBXN7 (positive feedback loop).
Biological pathway or process:

EMT (promotes); fibrosis (promotes); invasion (not specified)

Detected method:
Q
M
Validation methods:

Microarray; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Sanger Sequencing; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; FISH / smFISH; Western Blot; IF (Immunofluorescence); RNA Pull-Down; RIP (RNA Immunoprecipitation); Luciferase Reporter Assay; ChIP / ChIP-seq; Transfection; In Vivo Animal Model; ELISA; H&E Staining

Clinical significance:

circUBXN7 is significantly upregulated in DKD patient plasma, correlates with renal function (urinary albumin and UACR), and might serve as an independent biomarker for DKD patients.

Description:

circUBXN7 is up-regulated in DKD patient plasma and HG-stimulated HK-2 cells, and promotes macrophage activation/infiltration, tubular EMT, and renal fibrosis, worsening DKD phenotypes in db/db mice. Mechanistically, it binds IGF2BP2 to enhance SP1 mRNA stability and forms a positive feedback loop where SP1 transcriptionally increases circUBXN7.

Confidence score:

0.8133

Other information
Title:

CircUBXN7 promotes macrophage infiltration and renal fibrosis associated with the IGF2BP2-dependent SP1 mRNA stability in diabetic kidney disease.

Journal: Frontiers in immunology
Published: 2023
PubMed ID: 37744330
Study type:

combined biological and clinical study

Data availability: GSE231923 (GEO)
Code availability: -