circRNA basic information
circBase ID: hsa_circ_0072391
Name: hsa_circ_HMGCS1
Synonym: circ_0072391 / circ_HMGCS1
Host Gene: HMGCS1
Genomic location(hg19): chr5:43295853-43297268:-
Genomic location(hg38): chr5:43295751-43297166:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

-

Cell lines:

HepG2; SMMC-7721; HepG2 R; SMMC-7721R

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: IL-7
Associated microRNA: miR-338-5p
Biological function: promotes cisplatin resistance (chemoresistance) and decreases cisplatin-induced apoptosis in HCC cells
Molecular mechanism: ceRNA mechanism: circ_HMGCS1 sponges miR-338-5p to upregulate IL-7, contributing to cisplatin resistance
Biological pathway or process:

chemoresistance (promotes); apoptosis (inhibits); proliferation (promotes); ceRNA regulation (promotes); immune regulation (other)

Detected method:
Q
S
Validation methods:

Bioinformatics Analysis; RT-qPCR; Back-Splice Junction PCR / divergent primers PCR; RNase R Treatment; Actinomycin D / DRB Stability Assay; Nuclear-Cytoplasmic Fractionation; Luciferase Reporter Assay; RNA Pull-Down; Transfection; CCK8; Annexin V/PI Flow Cytometry; Western Blot; RNA-seq

Clinical significance:

circ_HMGCS1 might be a valuable biomarker or target for HCC

Description:

circ_HMGCS1 is up-regulated in cisplatin-resistant HCC cell lines and promotes chemoresistance by reducing cisplatin-induced apoptosis and sustaining proliferation. Mechanistically, it acts as a sponge for miR-338-5p to upregulate IL-7, forming a circ_HMGCS1/miR-338-5p/IL-7 axis that contributes to resistance and may relate to immune regulation via IL-7.

Confidence score:

0.7884

Other information
Title:

circ_HMGCS1 modulates hepatocellular carcinoma chemoresistance via miR-338-5p/IL-7 pathway.

Journal: Journal of cellular and molecular medicine
Published: 2024
PubMed ID: 38445791
Study type:

biological research

Data availability: GSE159220; GSE114564; GSE77509
Code availability: -