circRNA basic information
circBase ID: hsa_circ_0072309
Name: hsa_circ_LIFR
Synonym: -
Host Gene: LIFR
Genomic location(hg19): chr5:38523520-38530768:-
Genomic location(hg38): chr5:38523418-38530666:-
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005291
MONDO name: brain aneurysm
Disease details: intracranial aneurysm
Disease DO ID:
10941
Disease MeSH ID:
D002532
Disease NCIt ID:
-
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

IA walls; superficial temporal arteries (STAs); peripheral blood

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: DDR2, SAT2
Associated microRNA: hsa-miR-519e-5p, hsa-miR-516b-5p
Biological function: Associated with SMC dysfunction and vascular injury; regulates SMC-related genes (DDR2, SAT2) in IA via ceRNA.
Molecular mechanism: ceRNA (miRNA sponge) mechanism regulating DDR2 and SAT2 via hsa-miR-519e-5p and hsa-miR-516b-5p.
Biological pathway or process:

ceRNA regulation (other); mitochondrial function (unclear); apoptosis (unclear)

Detected method:
Q
S
Validation methods:

RNA-seq; RNase R Treatment; RT-qPCR; Clinical Sample Validation; ROC Analysis; Bioinformatics Analysis

Clinical significance:

Differentially expressed in peripheral blood of IA patients; potential noninvasive diagnostic biomarker with ROC AUC 0.7544.

Description:

hsa_circ_0072309 is down-regulated in intracranial aneurysm tissues and also shows consistent down-regulation in peripheral blood. It likely acts as a ceRNA by sponging hsa-miR-519e-5p and hsa-miR-516b-5p to regulate DDR2 and SAT2, implicating smooth muscle cell dysfunction and vascular injury, and it shows diagnostic potential by ROC analysis.

Confidence score:

0.5963

Other information
Title:

High-Throughput Data Reveals Novel Circular RNAs via Competitive Endogenous RNA Networks Associated with Human Intracranial Aneurysms.

Journal: Medical science monitor : international medical journal of experimental and clinical research
Published: 2019
PubMed ID: 31254341
Study type:

combined biological and clinical study

Data availability: -
Code availability: -