circRNA basic information
circBase ID: -
Name: hsa_circ_CSMD2
Synonym: circ-CSMD2 / circRNA-CSMD2
Host Gene: CSMD2
Genomic location(hg19): -
Genomic location(hg38): -
Subcellular localization: not tested
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0018874
MONDO name: acute myeloid leukemia
Disease details: acute myeloid leukemia / AML
Disease DO ID:
9119
Disease MeSH ID:
D015470
Disease NCIt ID:
C3171
Disease ICD11 ID:
-
Disease OMIM ID:
601626
Species: Human
Species details: Homo sapiens
Tissue specimen:

bone marrow; bone marrow mononuclear cells

Cell lines:

-

In vivo animal model:

-

circRNA-disease information
Expression pattern:
UP
Associated gene: -
Associated microRNA: -
Biological function: Differentially expressed in AML and evaluated as a candidate biomarker for distinguishing AML patients from healthy donor controls.
Molecular mechanism: Not experimentally specified for this circRNA; the study discussed possible effects on parental gene transcription or competitive binding to target microRNAs.
Biological pathway or process:

not specified

Detected method:
Q
M
Validation methods:

RNase R Treatment; RT-qPCR; Microarray; Clinical Sample Validation; Survival Analysis; ROC Analysis; Bioinformatics Analysis

Clinical significance:

circ-CSMD2 distinguished AML patients from healthy donor controls, but was not correlated with risk stratification, complete remission, EFS or OS.

Description:

circ-CSMD2 was validated by RT-qPCR as up-regulated in AML BMMCs. It showed diagnostic potential for distinguishing AML patients from healthy controls, but no significant survival association was reported.

Confidence score:

0.636

Other information
Title:

Circular RNA profile of acute myeloid leukaemia indicates circular RNA annexin A2 as a potential biomarker and therapeutic target for acute myeloid leukaemia.

Journal: American journal of translational research
Published: 2020
PubMed ID: 32509169
Study type:

combined clinical and bioinformatics study

Data availability: -
Code availability: -