circRNA basic information
circBase ID: hsa_circ_0003528
Name: hsa_circ_SEC24A
Synonym: circSEC24A
Host Gene: SEC24A
Genomic location(hg19): chr5:134032815-134044578:+
Genomic location(hg38): chr5:134697125-134708888:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0007256
MONDO name: hepatocellular carcinoma
Disease details: hepatocellular carcinoma / HCC
Disease DO ID:
684, 686
Disease MeSH ID:
D006528
Disease NCIt ID:
C3099
Disease ICD11 ID:
1294035808
Disease OMIM ID:
114550
Species: Human
Species details: Homo sapiens
Tissue specimen:

HCC tissue; adjacent normal tissues; tumor tissues

Cell lines:

HCCLM3; Hep3B; THLE-2

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: MMP3
Associated microRNA: miR-421
Biological function: Promotes proliferation, migration, invasion and EMT in HCC cells; circSEC24A knockdown suppresses tumor growth in vivo.
Molecular mechanism: Acts as a ceRNA/miRNA sponge for miR-421, thereby regulating MMP3 to modulate EMT and tumor progression.
Biological pathway or process:

proliferation (promotes); migration (promotes); invasion (promotes); EMT (promotes); metastasis (promotes); ceRNA regulation (promotes)

Detected method:
Q
M
Validation methods:

Microarray; Bioinformatics Analysis; RT-qPCR; FISH / smFISH; Luciferase Reporter Assay; RNA Pull-Down; Transfection; CCK8; Colony Formation Assay; Transwell Assay; Wound Healing Assay; Western Blot; Clinical Sample Validation; In Vivo Animal Model

Clinical significance:

circSEC24A could represent a potential target for HCC patient treatment.

Description:

circSEC24A (hsa_circ_0003528) is up-regulated in HCC and mainly localized in the cytoplasm. It promotes HCC cell proliferation, migration, invasion and EMT by sponging miR-421 and thereby relieving miR-421-mediated repression of MMP3; circSEC24A knockdown suppresses xenograft tumor growth.

Confidence score:

0.742

Other information
Title:

CircSEC24A (hsa_circ_0003528) interference suppresses epithelial-mesenchymal transition of hepatocellular carcinoma cells via miR-421/MMP3 axis.

Journal: Bioengineered
Published: 2022
PubMed ID: 35400271
Study type:

combined biological and clinical study

Data availability: GSE94508
Code availability: -