circRNA basic information
circBase ID: hsa_circ_0026416
Name: hsa_circ_KRT6C
Synonym: circ-KRT6C / circ-keratin 6c
Host Gene: KRT6C
Genomic location(hg19): chr12:52863194-52865516:-
Genomic location(hg38): chr12:52469410-52471732:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005575
MONDO name: colorectal cancer
Disease details: colorectal cancer / CRC
Disease DO ID:
5672, 9256
Disease MeSH ID:
-
Disease NCIt ID:
C4978
Disease ICD11 ID:
-
Disease OMIM ID:
114500
Species: Human
Species details: Homo sapiens
Tissue specimen:

tumorous and neighboring healthy tissues; colorectal cancer tissues; control tissues; dissected tumor tissues

Cell lines:

NCM460; Lovo; SW480; SW620; HCT-116

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
UP
Associated gene: PDL1, programmed cell death receptor ligand 1
Associated microRNA: miR-485-3p
Biological function: Promotes colorectal cancer cell growth, proliferation, migration, invasion, immune escape and tumor growth, while inhibiting apoptosis.
Molecular mechanism: circ-KRT6C functions as an miR-485-3p sponge to upregulate PDL1, thereby promoting malignant progression and immune evasion of colorectal cancer cells.
Biological pathway or process:

proliferation (promotes); apoptosis (inhibits); migration (promotes); invasion (promotes); immune regulation (promotes); ceRNA regulation (other)

Detected method:
Q
Validation methods:

RNase R Treatment; RT-qPCR; Clinical Sample Validation; Nuclear-Cytoplasmic Fractionation; Transfection; CCK8; Colony Formation Assay; Annexin V/PI Flow Cytometry; Transwell Assay; ELISA; Luciferase Reporter Assay; Western Blot; In Vivo Animal Model; Survival Analysis; Bioinformatics Analysis

Clinical significance:

circ-KRT6C level was associated with overall survival time of patients with colorectal cancer; high circ-KRT6C expression was associated with shorter survival, and circ-KRT6C was proposed as a new diagnosis target.

Description:

circ-KRT6C is an up-regulated oncogenic circRNA in colorectal cancer tissues and cells, and high expression is associated with poorer overall survival. Mechanistically, circ-KRT6C sponges miR-485-3p to increase PDL1 expression, promoting proliferation, migration, invasion, immune evasion and xenograft tumor growth while suppressing apoptosis.

Confidence score:

0.786

Other information
Title:

circ-Keratin 6c Promotes Malignant Progression and Immune Evasion of Colorectal Cancer through microRNA-485-3p/Programmed Cell Death Receptor Ligand 1 Axis.

Journal: The Journal of pharmacology and experimental therapeutics
Published: 2021
PubMed ID: 33771844
Study type:

combined biological and clinical study

Data availability: -
Code availability: -