circRNA basic information
circBase ID: hsa_circ_0006421
Name: hsa_circ_PTK2
Synonym: circPTK2
Host Gene: PTK2
Genomic location(hg19): chr8:141889569-141935848:-
Genomic location(hg38): chr8:140879470-140925749:-
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0001056
MONDO name: gastric cancer
Disease details: gastric cancer / GC
Disease DO ID:
10534
Disease MeSH ID:
-
Disease NCIt ID:
C9331
Disease ICD11 ID:
1397617262
Disease OMIM ID:
613659
Species: Human
Species details: Homo sapiens
Tissue specimen:

GC tissues; adjacent normal tissues; tumor tissue samples; lung tissues; xenograft tumor tissues

Cell lines:

GES-1; SGC-7901; MKN-28; HGC-27; MGC-803; HEK293T

In vivo animal model:

cell line-derived xenograft

circRNA-disease information
Expression pattern:
DN
Associated gene: CELF2, PTEN, PCNA, MMP2
Associated microRNA: miR-134-5p
Biological function: circPTK2 functions as a tumor suppressor in gastric cancer; overexpression suppresses proliferation, colony formation, DNA synthesis, cell invasion, xenograft tumor growth and lung metastasis, while knockdown promotes proliferation and invasion.
Molecular mechanism: circPTK2 sponges miR-134-5p to activate CELF2/PTEN signaling and downregulate PCNA and MMP2 expression.
Biological pathway or process:

ceRNA regulation (other); proliferation (inhibits); invasion (inhibits); metastasis (inhibits); other pathway/process (promotes)

Detected method:
Q
H
M
Validation methods:

Microarray; RNase R Treatment; Actinomycin D / DRB Stability Assay; RT-qPCR; FISH / smFISH; Clinical Sample Validation; circRIP; Luciferase Reporter Assay; Transfection; CCK8; EdU Staining; Colony Formation Assay; Transwell Assay; Western Blot; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); Survival Analysis; Bioinformatics Analysis

Clinical significance:

Low circPTK2 expression was related to poor survival in GC patients; patients with low circPTK2 expression had shorter OS than those with high circPTK2 expression, although circPTK2 was not an independent prognostic factor.

Description:

hsa_circ_0006421/circPTK2 is down-regulated in gastric cancer and acts as a tumor suppressor. It sponges miR-134-5p in the cytoplasm, activating CELF2/PTEN signaling and reducing PCNA and MMP2 expression, thereby inhibiting GC cell proliferation, invasion, tumor growth and lung metastasis. Low circPTK2 expression is associated with shorter overall survival in GC patients.

Confidence score:

0.8658

Other information
Title:

CircPTK2 inhibits the tumorigenesis and metastasis of gastric cancer by sponging miR-134-5p and activating CELF2/PTEN signaling.

Journal: Pathology, research and practice
Published: 2021
PubMed ID: 34562827
Study type:

combined biological and clinical study

Data availability: TCGA 2015 RNA sequencing database (http://xena.ucsc.edu/getting-starte d/); Supplementary data associated with this article can be found in the online version at doi:10.1016/j.prp.2021.153615; all data were generated or analyzed during this study are included in this published article and its additional files
Code availability: -