circRNA basic information
circBase ID: hsa_circ_0001946
Name: hsa_circ_CDR1
Synonym: -
Host Gene: CDR1
Genomic location(hg19): chrX:139865339-139866824:+
Genomic location(hg38): chrX:140783174-140784659:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0005233
MONDO name: non-small cell lung carcinoma
Disease details: non-small cell lung cancer
Disease DO ID:
3908
Disease MeSH ID:
D002289
Disease NCIt ID:
C2926
Disease ICD11 ID:
-
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

NSCLC tissues; paired adjacent non-tumor lung tissues

Cell lines:

MRC-5; A549; A549/DDP

In vivo animal model:

-

circRNA-disease information
Expression pattern:
DN
Associated gene: AGO2, XPA, XPC, Rad23B, RPA14, RPA32, RPA70, ERCC1
Associated microRNA: hsa-miR-7-5p, hsa-miR-671-5p, hsa-miR-1270, hsa-miR-3156-5p
Biological function: Inhibits viability and proliferation, inhibits migration and invasion, promotes apoptosis, and increases cisplatin sensitivity in NSCLC cells.
Molecular mechanism: May function as a ceRNA by sponging four predicted miRNAs and modulating the nucleotide excision repair (NER) signaling pathway, thereby affecting cisplatin resistance/sensitivity.
Biological pathway or process:

ceRNA regulation (other); drug resistance (inhibits); apoptosis (promotes); proliferation (inhibits); migration (inhibits); invasion (inhibits); other pathway/process (other)

Detected method:
Q
S
Validation methods:

RNA-seq; RT-qPCR; RNase R Treatment; Back-Splice Junction PCR / divergent primers PCR; Sanger Sequencing; FISH / smFISH; RIP (RNA Immunoprecipitation); Transfection; CCK8; EdU Staining; Colony Formation Assay; Wound Healing Assay; Transwell Assay; Flow Cytometry(Non-apoptosis/cycle); Western Blot; Luciferase Reporter Assay; Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

May serve as a novel biomarker for diagnosis and prediction of platinum-based chemosensitivity in patients with NSCLC.

Description:

hsa_circ_0001946 is down-regulated in NSCLC tissues and acts as a tumor suppressor in A549 cells. Its knockdown promotes proliferation/migration/invasion, reduces apoptosis, and increases cisplatin resistance by activating the NER pathway, potentially via a ceRNA mechanism involving miR-7-5p, miR-671-5p, miR-1270 and miR-3156-5p.

Confidence score:

0.8355

Other information
Title:

Hsa_circ_0001946 Inhibits Lung Cancer Progression and Mediates Cisplatin Sensitivity in Non-small Cell Lung Cancer via the Nucleotide Excision Repair Signaling Pathway.

Journal: Frontiers in oncology
Published: 2019
PubMed ID: 31249811
Study type:

combined biological and clinical study

Data availability: http://www.targetscan.org/mamm_31/
Code availability: -