circRNA basic information
circBase ID: hsa_circ_0004851
Name: hsa_circ_CAPRIN1
Synonym: hsa_circRNA_100791 / hsa_circ_100791
Host Gene: CAPRIN1
Genomic location(hg19): chr11:34111725-34113603:+
Genomic location(hg38): chr11:34090178-34092056:+
Subcellular localization: cytoplasm
 
 
 
 
 
 
 
Disease basic information
MONDO ID:
0011786
MONDO name: allergic rhinitis
Disease details: allergic rhinitis / AR
Disease DO ID:
4481
Disease MeSH ID:
-
Disease NCIt ID:
C79532
Disease ICD11 ID:
1711769234
Disease OMIM ID:
-
Species: Human
Species details: Homo sapiens
Tissue specimen:

peripheral blood mononuclear cells (PBMCs); nasal mucosa

Cell lines:

HNEpC

In vivo animal model:

other disease animal model

circRNA-disease information
Expression pattern:
UP
Associated gene: TRIM13, CAPRIN1, NF-kappaB
Associated microRNA: miR-487b-5p
Biological function: promotes inflammation and AR symptoms by increasing pro-inflammatory mediators and reducing IL-2 and IFN-gamma; knockdown alleviates AR symptoms
Molecular mechanism: acts as a miRNA sponge for miR-487b-5p to de-repress TRIM13, increasing p65 phosphorylation and inflammatory cytokine expression
Biological pathway or process:

inflammation (promotes); NF-kappaB (promotes); ceRNA regulation (promotes)

Detected method:
Q
S
Validation methods:

RT-qPCR; RNA-seq; RNase R Treatment; Sanger Sequencing; FISH / smFISH; divergent primers PCR; Luciferase Reporter Assay; Transfection; Western Blot; In Vivo Animal Model; H&E Staining; IHC (Immunohistochemistry); IF (Immunofluorescence); Bioinformatics Analysis; Clinical Sample Validation

Clinical significance:

hsa_circRNA_100791 could be a promising new therapeutic target for AR

Description:

hsa_circRNA_100791 is up-regulated in PBMCs and nasal mucosa of allergic rhinitis patients and mainly localizes to the cytoplasm. It promotes AR-associated inflammation by sponging miR-487b-5p to increase TRIM13 expression, enhancing NF-kappaB activation and pro-inflammatory cytokine production; knockdown alleviates OVA-induced AR symptoms in mice.

Confidence score:

0.8389

Other information
Title:

Hsa_circRNA_100791 Modulates Trim13 Through Sponging miR-487b-5p to Facilitate Inflammation in Allergic Rhinitis.

Journal: Journal of inflammation research
Published: 2024
PubMed ID: 39713717
Study type:

combined biological and clinical study

Data availability: -
Code availability: -